ADVANCED TOOLS FOR DATA ANALYSES IN NEUROSCIENCE

Événement à venir
Scientifique

12-20 Sept 2025, Strasbourg

11 20 septembre 2025

INTRODUCTION TO PYTHON PROGRAMMING

Thursday-Friday Sept 11th – Sept 12th

  • 9-12:30; lunch; 2-6 PM

Conda environment, Python basics (Object, Types, list, arrays, loops, conditions, functions, classes), Python packages (e.g. Numpy, Pandas, Matplotlib…), Python with AI.


SCHOOL

Monday Sept 15th

  • 8:30 AM: Welcome and course presentation
  • 9 - 12:30 AM: Fundamentals of spectral analysis
  • 2 - 4 PM: Oscillations analyses using MATLAB - From the raw data to the characterization of oscillatory activity
  • 4:30 - 6 PM: What to do when you have to estimate a function? Non-parametric regression techniques

Tuesday Sept 16th

  • 9 - 12:30 AM: Machine learning for beginners
  • 2 - 4 PM: Times series analysis, spike train statistics
  • 4:30 – 6:30 PM: Hands-on analyzing calcium imaging data

Wednesday Sept 17th

  • 9-11 AM: Network tools, functional connectivity analyses graph theory
  • 11:30-12:30 PM: Neuronal circuits modelling, microscale Part I
  • 2-4 PM: Neuronal circuits modelling, microscale Part II
  • 4:15 - 6 PM: Neuronal circuits modelling, macroscale (Virtual Brain)
  • 6:30 - 8 PM: Project selection, discussion

Thursday Sept 18th

  • 9-11 AM Automated algorithms for movement analysis
  • 11:15-12:30 AM: Practicals on movement analysis
  • 2-4 PM: Introduction to AI for data analyses
  • 4:30 - 8 PM: Projects

 Friday Sept 19th

  • 9 - 12:30 AM: Projects
  • 2 – 6:30 PM: Projects
  • 7 - 8 PM: Roundtable: reproducible science/open science

Saturday Sept 20th

  • 9 - 12 AM: Project presentations and debriefing


LOCAL ORGANIZING COMMITTEE

  • Jyotika Bahuguna, LNCA, University of Strasbourg
  • Demian Battaglia, LNCA, University of Strasbourg
  • Romain Goutagny, CNRS, University of Strasbourg Axel Hutt, INRIA, University of Strasbourg
  • Arvind Kumar, KTH Royal Institute of Technology, Sweden and USIAS, University of Strasbourg
  • Philippe Isope, CNRS, University of Strasbourg
  • Christophe Pouzat, IRMA, University of Strasbourg
  • Antoine Valera, CNRS, University of Strasbourg


FACULTY

  • Charlotte Bichara, CNRS, University of Strasbourg
  • Matilde Cordero-Erausquin, CNRS, University of Strasbourg
  • Pascale Quilichini, INSERM, Aix-Marseille University
  • Aline Stephan, University of Strasbourg
  • Greg Stephens, University of Amsterdam
  • Yaroslav Sych, CPJ CNRS, university of Strasbourg


REGISTRATION & CONTACT

The summer school is free of charge. Accommodation in shared rooms and lunches are also provided. However, travel expenses are the responsibility of the applicants.

Contact: philippe.isope[at]unistra.fr

Registration deadline: May 31.

Application form


SPONSORS

This summer school is supported by ITI NeuroStra (SFRI STRAT’US project ANR-20-SFRI-0012) and the University of Strasbourg Initiative of Excellence.

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